Cardinal - A mass spectrometry imaging toolbox for statistical analysis
Implements statistical & computational tools for analyzing mass spectrometry imaging datasets, including methods for efficient pre-processing, spatial segmentation, and classification.
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softwareinfrastructureproteomicslipidomicsmassspectrometryimagingmassspectrometryimmunooncologynormalizationclusteringclassificationregression
10.37 score 82 stars 4 dependents 300 scriptsCardinalIO - Read and write mass spectrometry imaging files
Fast and efficient reading and writing of mass spectrometry imaging data files. Supports imzML and Analyze 7.5 formats. Provides ontologies for mass spectrometry imaging.
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softwareinfrastructuredataimportmassspectrometryimagingmassspectrometrycpp
6.08 score 4 stars 5 dependents 8 scriptsCardinalWorkflows - Datasets and workflows for the Cardinal MSI
Datasets and workflows for Cardinal: DESI and MALDI examples including pig fetus, cardinal painting, and human RCC.
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experimentdatamassspectrometrydataimagingmassspectrometrydata
5.99 score 9 stars 12 scripts